Details for gene set BIOCARTA_THE CO-STIMULATORY SIGNAL DURING T-CELL ACTIVATION[GSEA]

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	ATM_minus
GeneSet	BIOCARTA_THE CO-STIMULATORY SIGNAL DURING T-CELL ACTIVATION
Enrichment Score (ES)	0.6561088
Normalized Enrichment Score (NES)	1.6258073
Nominal p-value	0.018656716
FDR q-value	0.52317303
FWER p-Value	0.998

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CD80	1427717_at 1432826_a_at 1440592_at 1451950_a_at 1454372_at 1457952_at	10	9.100	0.3791	Yes
2	CD3D	1422828_at	420	2.976	0.4846	Yes
3	PIK3R1	1425514_at 1425515_at 1438682_at 1444591_at 1451737_at	749	2.311	0.5661	Yes
4	CD28	1417597_at 1437025_at 1443703_at	812	2.227	0.6561	Yes
5	GRB2	1418508_a_at 1449111_a_at	3035	1.016	0.5971	No
6	CD247	1420716_at 1426079_at 1426396_at 1428059_at 1428060_at 1438392_at 1452539_a_at	6803	0.408	0.4423	No
7	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	8004	0.287	0.3995	No
8	CD3G	1419178_at	10672	0.046	0.2798	No
9	CD3E	1422105_at 1445748_at	12740	-0.138	0.1913	No
10	CD86	1420404_at 1449858_at	13436	-0.202	0.1680	No
11	ICOSLG	1419212_at 1426087_at	14124	-0.269	0.1479	No
12	CTLA4	1419334_at	14182	-0.275	0.1568	No
13	ICOS	1421930_at 1421931_at 1436598_at	17645	-0.730	0.0293	No
14	PIK3CA	1423144_at 1429434_at 1429435_x_at 1440054_at 1453134_at 1460326_at	18657	-0.956	0.0231	No
15	PTPN11	1421196_at 1427699_a_at 1451225_at	18980	-1.013	0.0506	No
16	ITK	1417171_at 1430833_at 1452518_a_at 1456836_at 1457120_at	21138	-2.018	0.0364	No